Workshop on Computational Molecular Biology (WCMB 2009)
Challenges with Growing Biological Data
University of Mysore, Mysore, Karnataka, India
December 9, 2009
Starting from developing high yield crops to expressing disease resistant genes in species require tremendous amount of data processing -- that includes gene and protein data, nucleotide sequences, and biomedical literature. These kinds of data are either local to the organization or available in the Web and are doubling every 18 months. To extract new meaning out of this data, one has to process more and more data to extract knowledge out of it. This kind of processing not only requires supercomputers but also superdatabases distributed over the Web. This has opened doors for innovation in Lifesciences, and all layers of computing -- the infrastructure, middleware, database and applications. This Workshop on Computational Molecular Biology (WCMB) will bring together researchers from various disciplines to exchange ideas to address some of these challenges and probable solutions. The goal of this workshop is to provide a forum where people from Lifesciences and Computing come together to exchange ideas and discuss different approaches and find solutions to solve the next generation data analysis problem.
Workshop Format
There will be presentation of original research work. This is based on submissions of papers addressing the use of computers, databases, and data networks in all domains of Lifesciences and Bioinformatics. There will also be few invited speakers from industry and research who will set the stage by presenting recent and future advancements in Bioinformatics and Computational Molecular Biology.
Call for Papers
We would like to invite papers which deal with Bioinformatics data sets, Computer science, and Mathematical modeling. Computation papers should contain a concise description of the biological problem being solved, and Lifesciences papers should show how computation or analysis improves the results. Relevant topics include, but are not limited to:
Biological Data Mining
Knowledge Discovering techniques and Data Mining
High Performance Bio-computing
Biological Databases & Data Integration
Web-mining of Biological data
Computational Systems Biology
Biological Data Visualization
Molecular sequence analysis
Algorithms in Assembly of shotgun sequences
Application of Information Theory in Lifesciences
Bio Statistics and its application in biology
Comparison and alignment methods
Recognition of genes and regulatory elements
Proteomics, Protein structure, Computational proteomics
Gene networks, Computational genetics
Gene expression and gene regulatory networks
Structural and functional genomics
Synthetic Biological Systems
Combinatorial libraries, Pathways, and Networks
Securing life -- Eliminating toxic effects of drugs
Text Mining, Information Extraction, and Language Processing
Biomedical Intelligence and Data Warehousing
Biomedical Databases & Information Systems
Multimedia Biomedical Databases and Biomedical Knowledge Discovery
Genomic entropy
Paper Submission Instructions
Both, submissions for refereeing and final copy for the proceedings, must be laid out according to the Camera Ready Copy format described below. It is the author's responsibility to make the paper readable, relevant and interesting before submission for consideration by referees. This includes legibility of diagrams and quality of English.
A paper cannot be longer than 7 pages.
All submissions must be in PDF format.
Camera Ready Copy Format
To help you easily format your submissions, this ZIP archive provides the following files:
wcmb-comad09.cls -- Document class file for Latex users
sample.bib -- Sample bibtex file for Latex users
wcmbFormat.tex -- Sample Latex file
wcmbFormat.doc -- For Microsoft Word users
wcmbFormat.pdf -- Sample PDF file
Submission
All submissions should be emailed to Dr. Asoke K Talukder.
Important dates
Last date for Paper Submission: 26 October 2009
Notification of Acceptance: 8 November 2009
Camera Ready Paper submission: 13 November 2009
Proceedings
The proceedings of the workshop will be published online.
Organization
Workshop Chairs
Dr. Nitaipada Bhattacharya, Saha Institute of Nuclear Physics, Kolkata, India
Dr. Asoke K Talukder, NIT Warangal, Warangal, India
Organizing Chairs
Prahalad H.A, Geschickten Solutions, Bangalore, India
Praveen Gupta, Premas Biotech, New Delhi, India
Technical Committee
Dr. Ambuj Mahanti, Indian Institute of Management Calcutta, India
Dr. Sailaja Deshmukh, Pune University, India
Dr. Abhijit Mitra, IIIT, Hyderabad, India
Dr. Sridhar Sivasubbu, IGIB, Delhi, India
Dr. Indira Ghosh, School of Informatics Technology, JNU, New Delhi, India
Dr. Rajat Kumar De, Indian Statistical Institute, Kolkata, India
Dr. Subhashish Mukherjee, Calcutta University, India
Dr. Lakshminarayan Choudur, HP Intelligent Information Management Lab, USA
Dr. Nuno M Garcia, Universidade Lusófona de Humanidades e Tecnologias, Portugal
Dr. Srinath Srinivasa, IIIT, Bangalore, India
Dr. A. S. Moghe, Bharati Vidyapeeth University, Pune, India